Testing predictions of beetle community patterns derived empirically using remote sensing

Patterns generated from ecological surveys are rarely tested in similar habitats to assess the accuracy of predictions. Testing empirically derived predictions provides a strong tool for establishing the consistency of general patterns in ecology. We test the consistency of beetle community associations with habitat complexity in open canopy forests and make both community and morphospecies-level comparisons with results from a previous study. We use Normalized Difference Vegetation Indices (NDVIs) from remote sensing as a surrogate for habitat complexity. The positive relationships between NDVIs and site-based beetle species richness and abundance were consistent in open canopy forests both south and north of Sydney, Australia. NDVIs were also useful for predicting differences in beetle composition in open canopy forests. Taxon-specific responses to NDVI differences in 'southern forests' were very similar to responses in 'northern forests', most likely reflecting beetle trophic roles. This study shows that NDVIs can be used as rapid biodiversity indicators, when integrated with identified faunal responses to vegetation structure, provided that the lower vegetation strata may be measured by remote sensing.     

Using remote underwater video to estimate freshwater fish species richness

Species richness records from replicated deployments of baited remote underwater video stations (BRUVS) and unbaited remote underwater video stations (UBRUVS) in shallow (<1 m) and deep (>1 m) water were compared with those obtained from using fyke nets, gillnets and beach seines. Maximum species richness (14 species) was achieved through a combination of conventional netting and camera‐based techniques. Chanos chanos was the only species not recorded on camera, whereas Lutjanus argentimaculatus, Selenotoca multifasciata and Gerres filamentosus were recorded on camera in all three waterholes but were not detected by netting. BRUVSs and UBRUVSs provided versatile techniques that were effective at a range of depths and microhabitats. It is concluded that cameras warrant application in aquatic areas of high conservation value with high visibility. Non‐extractive video methods are particularly desirable where threatened species are a focus of monitoring or might be encountered as by‐catch in net meshes.     

Species co‐occurrence patterns and dietary resource competition in primates

Diamond (Assembly of species communities. In: Cody ML, Diamond JM, editors. Ecology and evolution of communities. Cambridge: Belknap. p 342–444 ( 1975 )) argued that interspecific competition between species occupying similar niches results in a nonrandom pattern of species distributions. In particular, some species pairs may never be found in the same community due to competitive exclusion. Rigorous analytical methods have been developed to investigate the possible role that interspecific competition has on the evolution of communities. Many studies that have implemented these methods have shown support for Diamond's assembly rules, yet there are numerous exceptions. We build on this previous research by examining the co‐occurrence patterns of primate species in 109 communities from across the world. We used EcoSim to calculate a checkerboard (C) score for each region. The C score provides a measure of the proportion of species pairs that do not co‐occur in a set of communities. High C scores indicate that species are nonrandomly distributed throughout a region, and interspecific competition may be driving patterns of competitive exclusion. We conducted two sets of analyses. One included all primate species per region, and the second analysis assigned each species to one of four dietary guilds: frugivores, folivores, insectivores, and frugivore‐insectivores. Using all species per region, we found significantly high C scores in 9 of 10 regions examined. For frugivores, we found significantly high‐C scores in more than 50% of regions. In contrast, only 23% of regions exhibited significantly high‐C scores for folivores. Our results suggest that communities are nonrandomly structured and may be the result of greater levels of interspecific competition between frugivores compared to folivores. Am J Phys Anthropol, 2010. © 2010 Wiley‐Liss, Inc.     

The reliability of a composite biodiversity indicator in predicting bird species richness at different spatial scales

Several biodiversity features can be linked to landscape heterogeneity, that, in turn, can be informative for management and conservation purposes. Usually, the more the landscape is complex the more the biodiversity increases. Biodiversity indicators can be a useful tool to assess biodiversity status, in function of landscape heterogeneity. In this study, we developed a biodiversity indicator, based on Shannon diversity index and built from distribution maps of protected species. With such an approach, we seek to evaluate the feasibility of using a combination of target species as a surrogate for assessing the status of the whole bird community. Our approach was spread over multiple spatial scales, to determine which was the most informative. We selected four species protected by European regulation and generated a presence-absence map from species distribution modelling. We, therefore, used the FRAGSTATS biodiversity metric to calculate Shannon index for the overlapped presence-absence maps, at two spatial scales (500 m and 1000 m). Then, the relationships with the whole community was assessed through generalised least square models, at the spatial scale of 4 ha, 9 ha and 25 ha. Results showed that the higher rate of variability of community was explained by the biodiversity indicator at 1000 m scale. Indeed, the more informative spatial scale for the whole bird community was 9 ha. In addition, a pattern emerged about the relationships between biodiversity indicator and community richness, that is worth of further research. Our study demonstrates that the usefulness of surrogate species for biodiversity and community assessment can become clear only at a certain spatial scales. Indeed, they can be highly predictive of the whole community, and highly informative for conservation planning. Moreover, their use can optimize biodiversity monitoring and conservation, focusing on a small number of noteworthy species.     

The mantle, ink sac, ink, arm hooks and soft body debris associated with the shells in Late Triassic coleoid cephalopod Phragmoteuthis from the Austrian Alps

Fragmentarily preserved shells – mainly pro-ostraca, in several cases also phragmocones – occurring together with arm hooks and the ink sac of the Carnian (Late Triassic) coleoid cephalopod Phragmoteuthis bisinuata (Bronn) from Lunz (Austria) are examined with the scanning electron microscope and energy-dispersive spectrometer. The pro-ostracum bears black, shiny, pitch-like sheets. The black sheets, the ink sac content and the arm hooks have a granular ultrastructure of 0.1–1 μm grain size. The arm hooks and black sheets are micro-laminated; each lamina consists of fibres. The ink consists of an agglomerate of grains. On the ventral (internal) side of the pro-ostracum, the black sheets occasionally bear agglomerates of homogeneous, ink-like material along with heterogeneous structures. The pro-ostracum has crystal-shaped units with lamello-columnar ultrastructure of the inner layer and plate ultrastructure of the outer layer. This resembles the Late Triassic Lunzoteuthis [Doguzhaeva, L.A., Mutvei, H., Summesberger, H., 2005a. A Late Triassic coleoid from the Austrian Alps: the pro-ostracum viewpoint. In: Kostak, M., Marek, J. (Eds.), Proceedings of the 2nd International Symposium on Coleoid Cephalopods Through Time. Short Papers/Abstracts Vol. Prague, 26–29 September, 2005, pp. 55–59] and Early Jurassic Belemnotheutis [Doguzhaeva, L.A., Donovan, D.T., Mutvei, H., 2005b. The rostrum, conotheca and pro-ostracum in the Jurassic coleoid Belemnotheutis Pearce from Wiltshire, England. In: Kostak, M., Marek, J. (Eds.), Proceedings of the 2nd International Symposium on Coleoid Cephalopods Through Time. Short Papers/Abstracts Vol. Prague, 26–29 September, 2005, pp. 45–49]. The black sheets, the material on their inner surface, the ink and the arm hooks consist of carbon, occasionally with minor amounts of sulfur. The shell is of calcium carbonate.Based on their organic composition, position in the shell and lamello-fibrillar ultrastructure, the black sheets are considered to be remains of the mantle, sometimes with ink sac and soft body debris. The carbon composition and granular ultrastructure of arm hooks, ink, and soft tissue remains indicate that the non-mineralized structures are pseudomorphosed by carbon (carbonization), possibly due to C-accumulating bacteria.     

Synthesis and characterization of new water stable antimony(III) complex with pyrimidine-2-thione and in vitro biological study

A novel water stable, antimony(III) complex with the heterocyclic thioamide; 2-mercapto-pyrimidine (pmtH), of formula [Sb(pmt)₃] · 0.5(CH₃OH), has been synthesized and characterized by elemental analysis, ¹H, ¹³C NMR and FT-IR spectroscopic techniques. Crystal structure of the molecule has been determined by X-ray diffraction at ambient conditions. The compound [C₁₂H₉N₆S₃Sb · 0.5(CH₃OH)] is monoclinic, space group P2₁/c, a = 7.0646(7), b = 16.3767(14), c = 14.7265(13) Å, β = 92.016(7)°, Z = 4. In complex, three sulfur and three nitrogen atoms from thione ligands form a distorted pendagonal pyramidal geometry around antimony(III). The toxicity of the compound against tumor pleiomorphic cells, which has been isolated from a leiomyosarcoma tumor in the Wistar rat (chemical carcinogenesis using BaP) was studied in vitro. The results show that the compound did not destroy or prevent multiplication in vitro in leiomyosarcoma cells in low doses. The influence of the compound in the platelet aggregation, which correlates with the above tumor cells enhanced metastatic potential, has also been studied. The anti-metastatic capability study shows that the compound inhibited cancer cell induced aggregation up to the value of 10% in all mM concentrations tested.     

Effects of peach branches returning on autotoxins and microbes in soil and tree growth of peaches

Aims This study aimed to investigate the effects of branch returning on the growth of peach (Amygdalus persica "Chunmei/Maotao") saplings, soil enzyme activity, and soil contents of phenolic acids and amygdalin, thereby providing scientific evidence against the application of branch returning for peach trees. Methods One-year-old potted peach tree (Amygdalus persica "Chunmei/Maotao") was used in this study with four agricultural treatments applied, including soil coverage by fragmented peach tree branches (fragment treatment;1.5 and 22.5 g·kg^-1) and applying leachate solutions of peach tree branches to soil (leachate treatment; 1.5 and 22.5 g·kg^-1). No branch addition was used as control (CK). Solid phase extraction, high performance liquid chromatography (HPLC), biological high-throughput sequencing was used to determine the content of autotoxic substances, and microbial community structure in soil. Soil coverage and leachate solution treatments of 30 g and 450 g branches applied to the peach trees were described as 1.5 and 22.5 g·kg^-1, respectively in this paper.Important findings Compared with CK, the phenolic acid and amygdalin contents significantly increased after both fragment and leachate treatments in high quantities (22.5 g·kg^-1). Soil microbial community structure altered in both treatments, with the proportion of fungi (particularly Agaricomycetes, Tubeufia and Cystofilobasidiaceae) increased significantly and bacteria decreased accordingly. Invertase activity in both high-quantity treatments exceeded that in the CK significantly. The activity of catalase and urease was higher at first and then decreased relative to CK under high-quantity fragment and leachate treatments. Specifically, the effect of leachate treatment on enzyme activity was higher than the fragment treatment in the short term. Chlorophyll content, ground diameter (diameter of 5 cm from the ground) growth and net photosynthesis rate of plants were lower in high-quantity fragment and leachate treatments than those in CK, with earlier retardation of new shoot growth. We observed an increase in soil phenolic acids and enzymes in treatments in normal pruning quantity, while no inhibition effect was found on the tree growth. In conclusion, autotoxins (such as phenolic acid and amygdalin) inhibited the growth of peach trees both directly and indirectly through changing soil enzyme activity and microbial community.     

Shifts in bacterial communities of two caribbean reef-building coral species affected by white plague disease

Coral reefs are deteriorating at an alarming rate mainly as a consequence of the emergence of coral diseases. The white plague disease (WPD) is the most prevalent coral disease in the southwestern Caribbean, affecting dozens of coral species. However, the identification of a single causal agent has proved problematic. This suggests more complex etiological scenarios involving alterations in the dynamic interaction between environmental factors, the coral immune system and the symbiotic microbial communities. Here we compare the microbiome of healthy and WPD-affected corals from the two reef-building species Diploria strigosa and Siderastrea siderea collected at the Tayrona National Park in the Caribbean of Colombia. Microbiomes were analyzed by combining culture-dependent methods and pyrosequencing of 16S ribosomal DNA (rDNA) V5-V6 hypervariable regions. A total of 20 410 classifiable 16S rDNA sequences reads were obtained including all samples. No significant differences in operational taxonomic unit diversity were found between healthy and affected tissues; however, a significant increase of Alphaproteobacteria and a concomitant decrease in the Beta- and Gammaproteobacteria was observed in WPD-affected corals of both species. Significant shifts were also observed in the orders Rhizobiales, Caulobacteriales, Burkholderiales, Rhodobacterales, Aleteromonadales and Xanthomonadales, although they were not consistent between the two coral species. These shifts in the microbiome structure of WPD-affected corals suggest a loss of community-mediated growth control mechanisms on bacterial populations specific for each holobiont system.     

Structure and species richness in wetland continua on sandy soils in subtropical and tropical Australia

Net photosynthetic fixation of wetland plant communities is confined to the period of the year when the surface soil is not waterlogged and is thus well aerated. In the open‐structured vegetation continuum across freshwater wetlands on sandy soils in subtropical and tropical Australia, the sum of the foliage projective covers (FPCs) of the overstorey and understorey strata remains constant, while that of the overstorey decreases to zero as seasonal waterlogging (and anaerobic conditions) in the surface root systems increases. Density and height of the overstorey trees – of only one or two species – and species richness (number of species per hectare) in the understorey decreases along this waterlogging gradient. Melaleuca paperbark trees, possessing surface roots with cortical aerenchyma, may form a closed‐forest at the edge of the wetland continuum wherever there is a continuous flow of aerated water. As global warming progresses, an increase in air temperature in the atmosphere flowing over and through the wetland continuum during the short period of annual foliage‐growth will affect the combined FPCs of overstorey and understorey strata, as well as the leaf‐specific weights of all leaves throughout the plant community. With a reduction in net photosynthetic fixation, species richness of the plant community will slowly decline.     

Long-term cathode performance and the microbial communities that develop in microbial fuel cells fed different fermentation endproducts

To better understand how cathode performance and substrates affected communities that evolved in these reactors over long periods of time, microbial fuel cells were operated for more than 1 year with individual endproducts of lignocellulose fermentation (acetic acid, formic acid, lactic acid, succinic acid, or ethanol). Large variations in reactor performance were primarily due to the specific substrates, with power densities ranging from 835 ± 21 to 62 ± 1 mW/m³. Cathodes performance degraded over time, as shown by an increase in power of up to 26% when the cathode biofilm was removed, and 118% using new cathodes. Communities that developed on the anodes included exoelectrogenic families, such as Rhodobacteraceae, Geobacteraceae, and Peptococcaceae, with the Deltaproteobacteria dominating most reactors. Pelobacter propionicus was the predominant member in reactors fed acetic acid, and it was abundant in several other MFCs. These results provide valuable insights into the effects of long-term MFC operation on reactor performance.